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    Unlocking the power of ehrs: harnessing unstructured data for machine learning-based outcome predictions

    , Article Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS ; 2023 ; 1557170X (ISSN); 979-835032447-1 (ISBN) Noaeen, M ; Amini, S ; Bhasker, S ; Ghezelsefli, Z ; Ahmed, A ; Jafarinezhad, O ; Shakeri Hossein Abad, Z ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2023
    Abstract
    The integration of Electronic Health Records (EHRs) with Machine Learning (ML) models has become imperative in examining patient outcomes due to the vast amounts of clinical data they provide. However, critical information regarding social and behavioral factors that affect health, such as social isolation, stress, and mental health complexities, is often recorded in unstructured clinical notes, hindering its accessibility. This has resulted in an over-reliance on clinical data in current EHR-based research, potentially leading to disparities in health outcomes. This study aims to evaluate the impact of incorporating patient-specific context from unstructured EHR data on the accuracy and... 

    Development of an EPFC-Based Method Engineering Environment for Assembly-Based Construction of Agile Methodologies

    , M.Sc. Thesis Sharif University of Technology Shakeri Hossein Abad, Zahra (Author) ; Ramsin, Raman (Supervisor)
    Abstract
    Methodology engineering is a branch of software engineering which deals with the design, development, and modification of methodologies, and the techniques and tools for developing information systems. Methodology engineering requirements demand the support of Computer Aided Methodology Engineering (CAME) tools. Recently, method engineering focus has shifted towards Situational Method Engineering (SME); i.e. context-specific methodology development. The emergence of SME approaches has brought about various methods for methodology development; including ad hoc, paradigm-based, extension-based and assembly-based approaches. In the assembly-based strategy, appropriate method chunks are... 

    Towards tool support for situational engineering of agile methodologies

    , Article Proceedings - Asia-Pacific Software Engineering Conference, APSEC, 30 November 2010 through 3 December 2010, Sydney, NSW ; 2010 , Pages 326-335 ; 15301362 (ISSN) ; 9780769542669 (ISBN) Shakeri Hossein Abad, Z ; Hasani Sadi, M ; Ramsin, R ; Sharif University of Technology
    2010
    Abstract
    Various agile software development methodologies, practices, and techniques have been proposed in the last decade; some present novel ideas, while many are simply made up of tasks and techniques borrowed from prominent agile methodologies. Each of these methodologies prescribes a set of practices and techniques which are deemed appropriate for application in a specific context. However, there exists no single method which fits all project situations. This has resulted in the advent of Situational Method Engineering (SME) approaches, which are used for developing software methodologies that are tailored to fit the specific circumstances of the project situation at hand. Since tool support has... 

    Enhancing tool support for situational engineering of agile methodologies in eclipse

    , Article Studies in Computational Intelligence ; Volume 430 , 2012 , Pages 141-152 ; 1860949X (ISSN) ; 9783642304590 (ISBN) Shakeri Hossein Abad, Z ; Alipour, A ; Ramsin, R ; Lee R ; Sharif University of Technology
    2012
    Abstract
    In recent years, with the growth of software engineering, agile software development methodologies have also grown substantially, replacing plan-driven approaches in many areas. Although prominent agile methodologies are in wide use today, there is no method which is suitable for all situations. It has therefore become essential to apply Situational Method Engineering (SME) approaches to produce agile methodologies that are tailored to fit specific software development situations. Since SME is a complex process, and there is a vast pool of techniques, practices, activities, and processes available for composing agile methodologies, tool support-in the form of Computer Aided Method... 

    Enhancing Scalability in Software-defined Networks

    , M.Sc. Thesis Sharif University of Technology Shakeri, Sara (Author) ; Jahangir, Amir Hossein (Supervisor)
    Abstract
    Software Defined Networking (SDN) is an emerging paradigm which makes the network programmable by separating the control plane from data plane and makes both planes to work independently. There is a centralized controller and a programmable data plane in these networks architecture and forwarding data packets is realized by programming the data plane via an open interface called OpenFlow. OpenFlow is a communication protocol between control and data planes. The centralized architecture of these networks provides a global view of the underlying network to upper applications and brings numerous advantages such as routing, traffic engineering and QoS control. Despite these advantages there are... 

    Simulation of Imaging in Trolling Mode Atomic Force Microscopy by Molecular Dynamics Method

    , M.Sc. Thesis Sharif University of Technology Abdi Nemat Abad, Ahmad (Author) ; Nejat Pishkenari, Hossein (Supervisor)
    Abstract
    Atomic force microscopy (AFM), as an indispensable tool for nanoscale characterization, has major drawback for operation in a liquid environment arising from the large hydrodynamic drag on the vibrating cantilever. The newly introduced “Trolling Mode” (TR-Mode) AFM resolves this complication utilizing a specialized nanoneedle cantilever that keeps the cantilever outside of the liquid. Herein, a mechanical model with a lumped mass was developed to capture the dynamics of such cantilever with a nanoneedle tip. This new developed model was applied to investigate the effects of the needle – liquid interface on the performance of the AFM, including the imaging capability in liquid. Also... 

    Two mode mechanical non-Gaussian squeezed number state in a two-membrane optomechanical system

    , Article Optics Communications ; Volume 370 , 2016 , Pages 55-61 ; 00304018 (ISSN) Shakeri, S ; Mahmoudi, Z ; Zandi, M. H ; Bahrampour, A. R ; Sharif University of Technology
    Elsevier  2016
    Abstract
    We consider an optomechanical system with two membranes when a bichromatic laser field with red-sideband and blue-sideband frequencies is applied in the single photon strong coupling regime. It is shown that using the mode selecting method and under the Lamb-Dicke approximation, motion of membranes can evolve to single or two mode squeezed number states. By considering the environmental effect, a Wigner function is plotted for understanding the conditions that lead to the generation of non-Gaussian states. The results show that, in this system, initial states of membranes are important to generation of non-Gaussian mechanical squeezed number states. © 2016 Elsevier B.V. All rights reserved  

    A robust zero-watermarking scheme using Canny edge detector

    , Article International Journal of Electronic Security and Digital Forensics ; Volume 5, Issue 1 , 2013 , Pages 25-44 ; 1751911X (ISSN) Shakeri, M ; Jamzad, M ; Sharif University of Technology
    2013
    Abstract
    By expansion of digital multimedia and networking technology, the problem of ownership protection has become increasingly important. Digital watermarking is an efficient way for copyright protection of digital images. Traditional watermarking techniques degrade the quality of host image by embedding a watermark logo. Facing this problem, a new watermarking approach called zero-watermarking has been proposed. In zero-watermarking methods, the watermark does not require to be embedded into the protected image but it uses both the watermark and the protected image to generate a verification map which is registered to a trusted authority for further protection. In this paper we propose a robust... 

    A robust zero-watermark copyright protection scheme based on DWT and image normalization

    , Article Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 20 November 2011 through 23 November 2011 ; Volume 7088 LNCS, Issue PART 2 , November , 2011 , Pages 359-370 ; 03029743 (ISSN) ; 9783642253454 (ISBN) Shakeri, M ; Jamzad, M ; Sharif University of Technology
    2011
    Abstract
    Recently, protecting the copyright of digital media has become an imperative issue due to the growing illegal reproduction and modification of digital media. A large number of digital watermarking algorithms have been proposed to protect the integrity and copyright of images. Traditional watermarking schemes protect image copyright by embedding a watermark in the spatial or frequency domain of an image. However, these methods degrade the quality of the original image in some extend. In recent years, a new approach called zero-watermarking algorithms is introduced. In these methods, the watermark does not require to be embedded into the protected image but is used to generate a verification... 

    A robust copyright protection scheme based on discrete cosine transform and image normalization

    , Article 2011 7th Iranian Conference on Machine Vision and Image Processing, MVIP 2011 - Proceedings ; 2011 ; 9781457715358 (ISBN) Shakeri, M ; Jamzad, M ; Sharif University of Technology
    2011
    Abstract
    Watermarking is a way that is used to protect the copyright of images. As the existing watermarking methods are not robust enough a new novel scheme is needed. In this paper, we propose a zero-watermark discrete cosine transformation-based copyright protection scheme, in which a normalization procedure is applied in both watermark embedding and extraction to make our scheme more robust to geometric distortions. This method is resistant to malicious signal processing and geometric attacks such as blurring, JPEG compression, noise adding, sharpening, scaling, rotation and cropping. Experimental results on images with different complexity show that our proposed scheme outperforms related... 

    An efficient feature extraction methodology for blind image steganalysis using contourlet transform and zernike moments

    , Article 2013 10th International ISC Conference on Information Security and Cryptology, ISCISC 2013 ; Aug , 2013 , Page(s): 1 - 6 Shakeri, E ; Ghaemmaghami, S ; Sharif University of Technology
    IEEE Computer Society  2013
    Abstract
    We propose an effective blind image steganalysis based on contourlet transform and Zernike moments that improves the detection accuracy of universal image steganalysis methods. The proposed method examines randomness in the test image to distinguish between the stego and non-stego images. The suspicious image is decomposed by contourlet transform, and then the absolute Zernike moments of contourlet subbands coefficients of the image and linear prediction error of each contourlet subband are extracted as features for steganalysis. These features are fed to a nonlinear SVM classifier with an RBF kernel to distinguish between cover and stego images. Experimental results show that the proposed... 

    Integrated procedure, using differential evolution optimization of rate parameters, for design of small and accurate multistep global chemical mechanisms

    , Article Industrial and Engineering Chemistry Research ; Volume 57, Issue 10 , March , 2018 , Pages 3530-3544 ; 08885885 (ISSN) Shakeri, A ; Mazaheri, K ; Sharif University of Technology
    American Chemical Society  2018
    Abstract
    Three-dimensional analysis of combustion chambers in industrial gas turbines suffers from lack of simple and accurate reduced mechanisms for oxidation of hydrocarbon fuels. Here, an integrated procedure is introduced based on a differential evolution optimization technique. The procedure is flexible and modular and allows optimization of many rate parameters of a multistep global mechanism based on many different combustion criteria and inlet or operational conditions. The procedure uses any selected chemical reactor model and any reference combustion mechanism provided. Sample design criteria used here are flame temperature, ignition delay time, and concentration of selected species,... 

    Transportation Problem of Hub Network with Direct Links

    , M.Sc. Thesis Sharif University of Technology Shakeri, Hamed (Author) ; Haji, Rasoul (Supervisor)
    Abstract
    Hub and Spoke networks come into play when considering direct link between all origins and destinations is either impossible or expensive in a transportation system. In this kind of problems, some nodes are chosen as hub from all origin and destination nodes to collect flows and then distribute them. Implementing hub network leads to minimizing transportation cost, sorting flows and conveying them in economies of scale. Otherwise, shipping flows directly may cause decreasing the travelling distance and the delivery time consequently. In this dissertation, combination of hub network and direct shipment is investigated. To obtain the optimal hub locations and direct links between non-hub nodes... 

    Analyzing Cost Engineering Along With Presenting A Model To Reduce Cost Of industrial Products

    , M.Sc. Thesis Sharif University of Technology Shakeri, Ehsan (Author) ; Mostafavi, Mostafa (Supervisor)
    Abstract
    Lack of financial sources for production and performing projects has been an effective issue in all governmental and non-governmental organizations. So, using a structure with capability of detecting and forecasting all expenses and costs, and being able to convert the mass of data into useful and instrumental reports for managerial decision such as estimating total cost, selecting the syntax of production and etc is obvious for recourse management of every organization. Among the various components of the cost engineering system, cost management system by recording and allocating cost is an important issue in efficiency of every cost engineering system.In this thesis, Automotive Industrial... 

    Chemical kinetics Optimization for a DLE Combustor Optimization Using Numerical Method

    , Ph.D. Dissertation Sharif University of Technology Shakeri, Alireza (Author) ; Mazaheri, Karim (Supervisor)
    Abstract
    Control and reduction of gas turbines pollutants emissions are increasingly of major concern. Here we introduce and apply new algorithms for derivation of accurate and low cost skeletal chemical kinetics, optimization of global multi-step chemical kinetics, and optimization of geometry of Lean Premixed (LPM) dry low emission (DLE) combustors.A new reduction algorithm called SA-GEIE, based on sensitivity analysis of reaction mechanisms respect to ignition delay, flame temperature and pollutants concentration (NO and CO), is introduced. This algorithm is implemented to GRI-3.0 to produce a low cost methane oxidation skeletal mechanism with 118 reactions and 39 specie. The accuracy is assessed... 

    Optimal Assignment of Patients from Emergency Department to Inpatient Hospital Wards

    , M.Sc. Thesis Sharif University of Technology Shakeri, Mahdi (Author) ; Haji, Babak (Supervisor)
    Abstract
    Emergency Department (ED) overcrowding is one the most problems and challenges that every Emergency Department all over the world is facing with. This problem leads to some problems like prolonged waiting times and Length of Stay in Emergency Department. “Boarding time” is one of the most important ones, which is the time a patient spend for being transferred from Emergency Department to one of the Hospital Inpatient Wards. One important solution to this problem is “overflowing”, and it means allocating patients to an alternative ward rather than their primary ward. In practice, the overflowing process usually controlled in a myopic manner. Limited number of researches that focus in this... 

    Scaling of macroscopic superpositions close to a quantum phase transition

    , Article Physical Review B - Condensed Matter and Materials Physics ; Volume 93, Issue 19 , 2016 ; 10980121 (ISSN) Abad, T ; Karimipour, V ; Sharif University of Technology
    American Physical Society  2016
    Abstract
    It is well known that in a quantum phase transition (QPT), entanglement remains short ranged [Osterloh et al., Nature (London) 416, 608 (2005)NATUAS0028-083610.1038/416608a]. We ask if there is a quantum property entailing the whole system which diverges near this point. Using the recently proposed measures of quantum macroscopicity, we show that near a quantum critical point, it is the effective size of macroscopic superposition between the two symmetry breaking states which grows to the scale of system size, and its derivative with respect to the coupling shows both singular behavior and scaling properties  

    Critical slowing down of multiatom entanglement by Rydberg blockade

    , Article Physical Review A ; Volume 98, Issue 2 , 2018 ; 24699926 (ISSN) Abad, T ; Mølmer, K ; Sharif University of Technology
    American Physical Society  2018
    Abstract
    Laser excitation pulses that lead to perfect adiabatic state transfer in an ensemble of three-level ladder atoms lead to highly entangled states of many atoms if their highest excited state is subject to Rydberg blockade. Solution of the Schrödinger equation shows that it is increasingly difficult to ensure the adiabatic evolution as the number of atoms increases. A diminishing energy gap, significant variations in collective observables, and increased work fluctuations link the critical slowing down of the adiabatic evolution with a quantum-phase-transition-like behavior of the system. © 2018 American Physical Society  

    Failure analysis of a gas turbine compressor in a thermal power plant

    , Article Journal of Failure Analysis and Prevention ; Volume 13, Issue 3 , 2013 , Pages 313-319 ; 15477029 (ISSN) Masoumi Khalil Abad, E ; Farrahi, G. H ; Masoumi Khalil Abad, M ; Zare, A. A ; Parsa, S ; Sharif University of Technology
    2013
    Abstract
    This study presents the results of failure analysis of a 28 MW gas turbine at the Rei electrical power plant. The gas turbine failed during the shutdown period and near its second natural frequency at 4200 rpm. Initial inspections revealed that the compressor disk of stage 15 was fractured, and all of the stationary and rotary blades of stages 14-18 of the compressor had been detached or broken from the dovetail region of the disks. The fracture roots were investigated by performing finite element modeling and fractography analysis. It was shown that a crack was initiated from the disk edge on its interface with the rotor shaft and was propagated under cyclic loading. As a result of the... 

    Incorporating Three Echelon Location, Routing and Inventory Decisions in Supply Chain Network Design with Heterogeneous Vehicle

    , M.Sc. Thesis Sharif University of Technology Shakeri, Mohammad Hesam (Author) ; Shadrokh, Shahram (Supervisor)
    Abstract
    A key driver of the overall productivity and profitability of a supply chain is its distribution network which can be used to achieve a variety of the supply chain objectives ranging from low cost to high responsiveness. Designing a distribution network consists of three subproblems: location–allocation problem, vehicle routing problem, and inventory control problem. Because of high dependency among these problems, in the literature there are several papers integrating two of the above problems: location–routing problems, inventory–routing problems, and location–inventory problems.
    The three echelon location routing inventori problem (LRIP) is raised by the design of transportation...